The detailed information of tRNA gene sequence


Sequence ID>WENV170702787
Genome IDLKMJ01004100
Search identical group
Phylum/Class[LKMJ] soda lake metagenome; sample PL-Br10; brine of Picturesque Lake
Species
Start position on genome 2669
End posion on genome 2576
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
agccgaccct
tRNA gene sequence 
GGAAGTGTGGCTGAGCCAGGTTGAAGGCACCCGATTCGAAATCGGGCGGACGGTGAGAGC
CGTCCCGTGGGTTCAAATCCCACCACTTCCGCCA
Downstream region at tRNA end position 
ccatccacct
Secondary structure (Cloverleaf model)
>WENV170702787	Ser	CGA
                   t      GCCA ccatccacct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C A C C C     A
    C C G A        G      | | | | |     A
  A         G T C G       G T G G G     C
  G           + | |                 T T
  G         A G G C
    T T G A        A     CGGACGGTGAGAGCCGTCCC
                    C - G
                    C - G
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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