The detailed information of tRNA gene sequence


Sequence ID>WENV170702823
Genome IDLKMJ01004244
Search identical group
Phylum/Class[LKMJ] soda lake metagenome; sample PL-Br10; brine of Picturesque Lake
Species
Start position on genome 4474
End posion on genome 4565
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acgctacacc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGCTCCCCTGCTAAGGGAGTAAGGGCTTTATCTCC
CTTCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gatataaaaa
Secondary structure (Cloverleaf model)
>WENV170702823	Ser	GCT
                   c      GCCA gatataaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TAAGGGCTTTATCTCCCTTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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