The detailed information of tRNA gene sequence


Sequence ID>WENV170702870
Genome IDLKMJ01004418
Search identical group
Phylum/Class[LKMJ] soda lake metagenome; sample PL-Br10; brine of Picturesque Lake
Species
Start position on genome 7
End posion on genome 95
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
nnnattaaaT
tRNA gene sequence 
GGAAAGGTGGCAGAGTGGTTAATTGCACCAATTTTGAAAATTGGCGTGGCTTTGCGGTCA
CCGGGGGTTCGAATCCCTCCCTTTCCGAta
Downstream region at tRNA end position 
aaaaatcaaa
Secondary structure (Cloverleaf model)
>WENV170702870	Ser	TGA
                   T      GAta aaaaatcaaa
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    T       T T G C
      T A A        A     CGTGGCTTTGCGGTCACC
                    C - G
                    C - G
                    A - T
                    A - T
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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