The detailed information of tRNA gene sequence


Sequence ID>WENV170703236
Genome IDLKMJ01008335
Search identical group
Phylum/Class[LKMJ] soda lake metagenome; sample PL-Br10; brine of Picturesque Lake
Species
Start position on genome 6781
End posion on genome 6698
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttgagacgag
tRNA gene sequence 
GGTGGGATGGCAGAGTGGACTATTGCGCCTGCCTTGAAAGCAGGTGGCCTTCGGCCTCCA
GGGTTCGAATCCCTGTCCCACCGCat
Downstream region at tRNA end position 
tttctggcga
Secondary structure (Cloverleaf model)
>WENV170703236	Ser	TGA
                   g      GCat tttctggcga
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       C A G G G     C
    G       + | | |                 T T
    A       T T G C
      C T A        G     TGGCCTTCGGCCTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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