The detailed information of tRNA gene sequence


Sequence ID>WENV170703373
Genome IDLKMJ01010414
Search identical group
Phylum/Class[LKMJ] soda lake metagenome; sample PL-Br10; brine of Picturesque Lake
Species
Start position on genome 3310
End posion on genome 3236
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ttgtcgacgc
tRNA gene sequence 
GGGCTCGTAGATCAGCGGTAGATCATCCCCCTGGCACGGGGAAGGCCTCGGGTTCAAATC
CCGACGAGTCCACTA
Downstream region at tRNA end position 
tccttgcgcg
Secondary structure (Cloverleaf model)
>WENV170703373	Ala	GGC
                   c      ACTA tccttgcgcg
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     A G C C C     A
        G A        A      | | | | |     A
      C     C T A G       T C G G G     C
      G     | | | |                 T T
      G     G A T C
        T A        A     AGGCC
                    T - A
                    C - G
                    C - G
                    C - G
                    C - G
                  C       C
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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