The detailed information of tRNA gene sequence


Sequence ID>PHG0100031
Genome IDAF222060
Search identical group
Phylum/Classunclassified archaeal dsDNA viruses
SpeciesHalorubrum phage HF2 ECOR-9 (AF222060)
Start position on genome 18508
End posion on genome 18584
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ggtggttttT
tRNA gene sequence 
GGGGACGTAGCTCAGCTCGGACAGAGCGTTCGGCTTCTAACCGAAAGTGCGCGGGTTCAA
ATCCCGTCGTCTCCGTgc
Downstream region at tRNA end position 
ggtgtatcgt
Secondary structure (Cloverleaf model)
>PHG0100031	Arg	TCT
                   T      GTgc ggtgtatcgt
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T G C C C     A
    T C G A        A      + | | | |     A
  C         C T C G       G C G G G     C
  G         | | | |                 T T
  G         G A G C
    A C A          G     AGTGC
                    T - A
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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