The detailed information of tRNA gene sequence


Sequence ID>WENV170703954
Genome IDLKMJ01019584
Search identical group
Phylum/Class[LKMJ] soda lake metagenome; sample PL-Br10; brine of Picturesque Lake
Species
Start position on genome 5860
End posion on genome 5775
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cttacagtaa
tRNA gene sequence 
GTCGGGGTCGCATAGTCTGGTCATTGCGGTAGCTTGCTAAGCTACTGGGCTCACGCCCAC
GCGGGTTCAAATCCCGCCCCTGACGCtt
Downstream region at tRNA end position 
ctgcatctta
Secondary structure (Cloverleaf model)
>WENV170703954	Ser	GCT
                   a      GCtt ctgcatctta
                     G - C
                     T - A
                     C - G
                     G + T
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
    C T G A        C      | | | | |     A
  T         T A C G       G C G G G     C
  G           | | |                 T T
  G         T T G C
    T C A          G     TGGGCTCACGCCCAC
                    G - C
                    T - A
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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