The detailed information of tRNA gene sequence


Sequence ID>PHG0100033
Genome IDAF222060
Search identical group
Phylum/Classunclassified archaeal dsDNA viruses
SpeciesHalorubrum phage HF2 ECOR-9 (AF222060)
Start position on genome 74699
End posion on genome 74628
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cgctgatttt
tRNA gene sequence 
GAGACAGTAGTGTAGTGGTATCATCGGGCGTTTGGGACGCTCTTACGCCGGTTCGACTCC
GGCCTGTCTCACtc
Downstream region at tRNA end position 
taagaccctc
Secondary structure (Cloverleaf model)
>PHG0100033	Pro	TGG
                   t      ACtc taagaccctc
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C          T C
                    T     C G G C C     A
        G A        A      | | | | |     G
      T     T G T G       G C C G G     C
      G       | | +                 T T
      G     T C A T
        T A        C     TTAC
                    G - C
                    G + T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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