The detailed information of tRNA gene sequence


Sequence ID>WENV170704005
Genome IDLKMJ01020572
Search identical group
Phylum/Class[LKMJ] soda lake metagenome; sample PL-Br10; brine of Picturesque Lake
Species
Start position on genome 4214
End posion on genome 4138
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tttcggatgc
tRNA gene sequence 
GCCAAGGTGGCAGAGTCTGGCCTTACGCGGTTGCCTGCAGAGCAGCTACACGCCGGTTCA
AATCCGGCCCTTGGCTCtc
Downstream region at tRNA end position 
acacgaccgt
Secondary structure (Cloverleaf model)
>WENV170704005	Cys	GCA
                   c      TCtc acacgaccgt
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C G G C C     A
    C T G A        G      | | | | |     A
  T         G A C G       G C C G G     C
  G             | |                 T T
  G         A C G C
    C C T T        G     TACAC
                    G - C
                    T + G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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