The detailed information of tRNA gene sequence


Sequence ID>WENV170704196
Genome IDLKMJ01024922
Search identical group
Phylum/Class[LKMJ] soda lake metagenome; sample PL-Br10; brine of Picturesque Lake
Species
Start position on genome 107
End posion on genome 10
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ggttgattgc
tRNA gene sequence 
GGAAGTGGAAAGGGCACTGGTGGCCCTCCCGGACTTCAAATCCGGTGCACCGGGTTAACA
GCCTGGTGGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
tttttttatn
Secondary structure (Cloverleaf model)
>WENV170704196	SeC(p)	TCA
                   c      GCCA tttttttatn
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    A     T A C C C     A
      C A C        A      + | | | |     G
    T       G G G A       G T G G G     C
    G       | | | |                 T T
    G       C C C T
      T G G        C     TGCACCGGGTTAACAGCCTGGTGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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