The detailed information of tRNA gene sequence


Sequence ID>WENV170704216
Genome IDLLEJ01000027
Search identical group
Phylum/Class[LLEJ] bioreactor metagenome; day101 10degC chemostat 2011 inoculated with Wadden Sea sediment taken from the upper 2 cm of the
Species
Start position on genome 6019
End posion on genome 6094
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tatcttaagc
tRNA gene sequence 
AGGTCAGTAGCTCCAATGGTAGAGCGCCGGATTCCAAATCCGATGGCTGGGGGTTCGAGT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
ctaaattttt
Secondary structure (Cloverleaf model)
>WENV170704216	Trp	CCA
                   c      GCCA ctaaattttt
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      A A C        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     TGGCT
                    C   A
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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