The detailed information of tRNA gene sequence


Sequence ID>WENV170705614
Genome IDLNAP01000021
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 127213
End posion on genome 127303
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
attgtttctt
tRNA gene sequence 
GGAGAGATACCCAAGTGGCTCAAGGGGACCCTCTGCTAAGGGGTTAGACTGCGTTAGCGG
TGCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
taagttattt
Secondary structure (Cloverleaf model)
>WENV170705614	Ser	GCT
                   t      GCCA taagttattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        A      | | | | |     G
    G       A C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      T C A        G     TAGACTGCGTTAGCGGTGC
                    A - T
                    C - G
                    C - G
                    C - G
                    T + G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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