The detailed information of tRNA gene sequence


Sequence ID>WENV170705829
Genome IDLNAP01000419
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 41586
End posion on genome 41497
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcgaattgct
tRNA gene sequence 
GGAGAGGTGGTCGAGTGGTTTAAGGCAGCGGTCTTGAAAACCGCCGTAGTCGTGAGGCTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
taaaaaaaat
Secondary structure (Cloverleaf model)
>WENV170705829	Ser	TGA
                   t      GCCA taaaaaaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C T G       G T G G G     C
    G         | + |                 T T
    T       A G G C
      T T A        A     CGTAGTCGTGAGGCTACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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