The detailed information of tRNA gene sequence


Sequence ID>WENV170705960
Genome IDLNAP01000716
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 158
End posion on genome 248
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctgaagcctt
tRNA gene sequence 
GGAGAGATACCCAAGTGGCTCAAGGGGACCCTCTGCTAAGGGGTTAGACTGCGTAAGCGG
TGCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ttttcttttc
Secondary structure (Cloverleaf model)
>WENV170705960	Ser	GCT
                   t      GCCA ttttcttttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        A      | | | | |     G
    G       A C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      T C A        G     TAGACTGCGTAAGCGGTGC
                    A - T
                    C - G
                    C - G
                    C - G
                    T + G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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