The detailed information of tRNA gene sequence


Sequence ID>WENV170706028
Genome IDLNAP01000902
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 113877
End posion on genome 113789
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gacgagataC
tRNA gene sequence 
GGTGAAGTGTCCGAGTGGCTTAAGGAGCACGCCTGGAAAGTGTGTATACAAGAAATTGTA
TCGAGAGTTCGAATCTCTCCTTCACNNNnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170706028	Ser	GGA
                   C      NNnn nnnnnnnnnn
                     G   N
                     G - C
                     T - A
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G A G     C
    G         | | |                 T T
    C       A G G A
      T T A        G     TATACAAGAAATTGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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