The detailed information of tRNA gene sequence


Sequence ID>WENV170706164
Genome IDLNAP01001478
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 5600
End posion on genome 5524
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cggttcggtc
tRNA gene sequence 
GGGGCGTTAGCTCAGTTGGTTAGAGCAGAGGACTCATAATCCTTTGGTCCACAGTTCAAG
TCTGTGACGCCCTACCA
Downstream region at tRNA end position 
ttttctctga
Secondary structure (Cloverleaf model)
>WENV170706164	Met	CAT
                   c      ACCA ttttctctga
                     G + T
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A          T G
                    T     G T G T C     A
      T G A        A      | | | | |     A
    T       C T C G       C A C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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