The detailed information of tRNA gene sequence


Sequence ID>WENV170706208
Genome IDLNAP01001687
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 1050
End posion on genome 957
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcgttaaaac
tRNA gene sequence 
GGAGAGCTGGCCGAGTGGTCGAAGGCACTTCCCTGCTAAGGAAGCATACGGGCTTAAATC
TGTATCGAGGGTTCGAATCCCTCGCTCTCCGCCA
Downstream region at tRNA end position 
ccatccccat
Secondary structure (Cloverleaf model)
>WENV170706208	Ser	GCT
                   c      GCCA ccatccccat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     C - G          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        A     CATACGGGCTTAAATCTGTATC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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