The detailed information of tRNA gene sequence


Sequence ID>WENV170707032
Genome IDLNAP01011242
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 6107
End posion on genome 6182
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
ttaagccaaa
tRNA gene sequence 
GCCGATGTAGCTCAGTTGGTAGAGCAGCTCATTCGTAATGAGAAGGTCGGGGGTTCGACT
CCTCTCATCGGCACCA
Downstream region at tRNA end position 
ctccaaagcc
Secondary structure (Cloverleaf model)
>WENV170707032	Thr	CGT
                   a      ACCA ctccaaagcc
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     G - C          T C
                    T     T C T C C     A
      T G A        A      + | + | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G   A
                    C - G
                    T - A
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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