The detailed information of tRNA gene sequence


Sequence ID>WENV170707131
Genome IDLNAP01013480
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 2862
End posion on genome 2938
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcccacttgt
tRNA gene sequence 
TGCAGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTTGGTTCAAA
TCCAACCCCTGCACCCA
Downstream region at tRNA end position 
atttaaaccc
Secondary structure (Cloverleaf model)
>WENV170707131	Met	CAT
                   t      CCCA atttaaaccc
                     T - A
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A A C C     A
      C G A        G      | | | | |     A
    C       C G A G       G T T G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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