The detailed information of tRNA gene sequence


Sequence ID>WENV170707300
Genome IDLNAP01016818
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 4953
End posion on genome 4863
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnnnnnnnna
tRNA gene sequence 
GGACAGGTGGCCGAGCGGTTGAAGGCGCACGCCTGGAAAGCGTGTATACGTTTATAGCGT
ATCGAGGGTTCGAATCCCTCTCTGTCCGCCA
Downstream region at tRNA end position 
ggaatacata
Secondary structure (Cloverleaf model)
>WENV170707300	Ser	GGA
                   a      GCCA ggaatacata
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATACGTTTATAGCGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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