The detailed information of tRNA gene sequence


Sequence ID>WENV170707322
Genome IDLNAP01017384
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 12045
End posion on genome 11970
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttcggggtct
tRNA gene sequence 
AGGGGCATAGCTCAATTGGCAGAGCGTCGGTCTCCAAAACCGAAGGTTGTAGGTTCGATT
CCTACTGCCCCTGCCA
Downstream region at tRNA end position 
cagtcagttc
Secondary structure (Cloverleaf model)
>WENV170707322	Trp	CCA
                   t      GCCA cagtcagttc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T T
                    T     C A T C C     A
      T A A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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