The detailed information of tRNA gene sequence


Sequence ID>WENV170707529
Genome IDLNAP01023935
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 1078
End posion on genome 1002
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccgccgtcgt
tRNA gene sequence 
GGCGAGGTAGCTCAGCTGGTTAGAGCACGGGAATCATAATCCTGGGGTCGGGGGTTCAAG
TCCCTCTCTCGCTACCA
Downstream region at tRNA end position 
tcgatccccc
Secondary structure (Cloverleaf model)
>WENV170707529	Met	CAT
                   t      ACCA tcgatccccc
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G + T          T G
                    T     C T C C C     A
      C G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    G + T
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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