The detailed information of tRNA gene sequence


Sequence ID>WENV170707570
Genome IDLNAP01025687
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 439
End posion on genome 514
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cccacctcac
tRNA gene sequence 
AGGCGTGTAGCTCAATTGGTAGAGTAGCGGTCTCCAAAACCGTTGGTTGGGGGTTCGATT
CCCTCCGCGCCTGCCA
Downstream region at tRNA end position 
ctttaaaaca
Secondary structure (Cloverleaf model)
>WENV170707570	Trp	CCA
                   c      GCCA ctttaaaaca
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T + G
                     G - C          T T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     TGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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