The detailed information of tRNA gene sequence


Sequence ID>WENV170707597
Genome IDLNAP01026678
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 4685
End posion on genome 4761
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ctcctcaagt
tRNA gene sequence 
CGGAGTGTGGCTCAGTCTGGTAGAGCACCGCGTTCGGGACGCGGGGGTCGCAGGTTCAAA
TCCTGCCACTCCGACCA
Downstream region at tRNA end position 
tgcgaggcgg
Secondary structure (Cloverleaf model)
>WENV170707597	Pro	CGG
                   t      ACCA tgcgaggcgg
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     A
    C       C T C G       G C A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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