The detailed information of tRNA gene sequence


Sequence ID>WENV170707909
Genome IDLNAP01039230
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 887
End posion on genome 961
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
acgacttcat
tRNA gene sequence 
GGCGCTATCGTCTAACGGTTAGGACGGAGCCCTCTCAAGGCTTAAATACGGGTTCGATTC
CCGTTAGCGCTACCA
Downstream region at tRNA end position 
tattttcaat
Secondary structure (Cloverleaf model)
>WENV170707909	Glu	CTC
                   t      ACCA tattttcaat
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     A - T          T T
                    T     T G C C C     A
      C A A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAT
                    G + T
                    A - T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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