The detailed information of tRNA gene sequence


Sequence ID>WENV170707911
Genome IDLNAP01039339
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 34
End posion on genome 124
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tcaaaaaagt
tRNA gene sequence 
GGAGAGGTACCCAAGAGGCCCAAGGGGGTTGACTCGAAATCAACTAGGCGTGTCAAAGCG
TGCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
accatacgaa
Secondary structure (Cloverleaf model)
>WENV170707911	Ser	CGA
                   t      GCCA accatacgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      A G A        A      | | | | |     G
    G       A C C C       G T G G G     C
    G         | | |                 T T
    C       A G G G
      C C A        G     TAGGCGTGTCAAAGCGTGC
                    G - C
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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