The detailed information of tRNA gene sequence


Sequence ID>WENV170708000
Genome IDLNAP01043761
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 1011
End posion on genome 921
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcgtttttgt
tRNA gene sequence 
GGAGAGATGTCCGAGCGGTTGAAGGAGCACGCCTGGAAAGCGTGTGTACGTTAATAGCGT
ACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tttaacaatc
Secondary structure (Cloverleaf model)
>WENV170708000	Ser	GGA
                   t      GCCA tttaacaatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TGTACGTTAATAGCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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