The detailed information of tRNA gene sequence


Sequence ID>WENV170708199
Genome IDLNAP01057805
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 1250
End posion on genome 1338
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctggtatcaT
tRNA gene sequence 
GGAGAGGTGGTCGAGTGGTTTAAGGCAGCGGTCTTGAAAACCGCCGTGTCTTTGCGGGCA
CCGTGGGTTCGAATCCCACCCTCTCCGTtt
Downstream region at tRNA end position 
aaaaacctaa
Secondary structure (Cloverleaf model)
>WENV170708199	Ser	TGA
                   T      GTtt aaaaacctaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C T G       G T G G G     C
    G         | + |                 T T
    T       A G G C
      T T A        A     CGTGTCTTTGCGGGCACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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