The detailed information of tRNA gene sequence


Sequence ID>WENV170708229
Genome IDLNAP01060931
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 837
End posion on genome 761
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aaatcttttt
tRNA gene sequence 
GGGTCTGTAGCTCAGGTGGTTAGAGCGCGCCCCTGATAAGGGCGAGGTCGGTGGTTCGAG
TCCTCCTAGACCCACCA
Downstream region at tRNA end position 
ctctggatgt
Secondary structure (Cloverleaf model)
>WENV170708229	Ile	GAT
                   t      ACCA ctctggatgt
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G + T          T G
                    T     C C T C C     A
      G G A        A      | |   | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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