The detailed information of tRNA gene sequence


Sequence ID>WENV170708280
Genome IDLNAP01065155
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 983
End posion on genome 1059
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctaatcgtat
tRNA gene sequence 
AGGAGTGTAGCTCAACTGGCTAGAGCACCGGTCTCCAAAACCGGGGGTTGGGGGTTCGAG
TCCCTCCACTCCTGCCA
Downstream region at tRNA end position 
acgtaattcg
Secondary structure (Cloverleaf model)
>WENV170708280	Trp	CCA
                   t      GCCA acgtaattcg
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      C A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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