The detailed information of tRNA gene sequence


Sequence ID>WENV170708333
Genome IDLNAP01070917
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 971
End posion on genome 1046
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ccggtcttta
tRNA gene sequence 
GTCCCCATCGTCTAGAGGCCTAGGACATCGCCCTTTCACGGCGGTAACAGGGGTTCGAAT
CCCCTTGGGGACGCCA
Downstream region at tRNA end position 
gtnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170708333	Glu	TTC
                   a      GCCA gtnnnnnnnn
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     TAAC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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