The detailed information of tRNA gene sequence


Sequence ID>WENV170708411
Genome IDLNAP01079406
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 431
End posion on genome 336
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aggtcttgat
tRNA gene sequence 
GGAAGGTATTCGTGCCCGGTGGCACGGCCGGGCTTCAAACCCGGTTGGGGGCGTCAGACG
CTCCCAGGTAGGTTCGACTCCTGCTGCCTTCCGCCA
Downstream region at tRNA end position 
tatcaggcgc
Secondary structure (Cloverleaf model)
>WENV170708411	SeC	TCA
                   t      GCCA tatcaggcgc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     T + G
                     A - T          T C
                    T     C G T C C     A
      C C C        T      | + | | |     G
    G       G T G C       G T A G G     C
    G       | | | |                 T T
    T       C A C G
      G G          G     TTGGGGGCGTCAGACGCTCCCAG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK