The detailed information of tRNA gene sequence


Sequence ID>WENV170708433
Genome IDLNAP01081327
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 665
End posion on genome 589
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gaaaggttct
tRNA gene sequence 
GGGTCAGTAGCTCAGTCGGTTAGAGCACCGTCTTGATAAGGCGGGGGTCGTTGGTTCGAT
TCCAACTTGACCCACCA
Downstream region at tRNA end position 
cagcttttag
Secondary structure (Cloverleaf model)
>WENV170708433	Ile	GAT
                   t      ACCA cagcttttag
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     G + T          T T
                    T     C A A C C     A
      T G A        A      | | | | |     G
    C       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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