The detailed information of tRNA gene sequence


Sequence ID>WENV170708436
Genome IDLNAP01082161
Search identical group
Phylum/Class[LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with
Species
Start position on genome 367
End posion on genome 291
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caggctcagt
tRNA gene sequence 
CGCGAGGTGGAGCAGTCTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGCAGGTTCAAA
TCCTGCCCTCGCAACCA
Downstream region at tRNA end position 
cggattcgcg
Secondary structure (Cloverleaf model)
>WENV170708436	Met	CAT
                   t      ACCA cggattcgcg
                     C   A
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G C A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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