The detailed information of tRNA gene sequence


Sequence ID>WENV170708825
Genome IDLNFM01000001
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 857051
End posion on genome 856953
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
attttgattc
tRNA gene sequence 
GGAGGCGCATCCTGTCCGGTGATGGGCGCGGTCTTCAAAACCGTCAGCGGGTGCGCGAGA
GCGTACCTGGGTGGGTTCGACTCCCACACGCCTCCGCCA
Downstream region at tRNA end position 
gttttgaaag
Secondary structure (Cloverleaf model)
>WENV170708825	SeC(p)	TCA
                   c      GCCA gttttgaaag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     C   A          T C
                    A     C A C C C     A
      C C T        T      | | | | |     G
    G       G T C C       G T G G G     C
    G       + + | |                 T T
    T       T G G G
      G A          C     CAGCGGGTGCGCGAGAGCGTACCTGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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