The detailed information of tRNA gene sequence


Sequence ID>WENV170711084
Genome IDLNFM01003489
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 381
End posion on genome 289
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cagcaaaccc
tRNA gene sequence 
GGAGAGATGCCCGAGAGGCCGAAGGGGCTCCCCTGCTAAGGGAGTATAGGGTCAAAAGCT
CTATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gatgcatccg
Secondary structure (Cloverleaf model)
>WENV170711084	Ser	GCT
                   c      GCCA gatgcatccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      C G A        G     TATAGGGTCAAAAGCTCTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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