The detailed information of tRNA gene sequence


Sequence ID>WENV170711341
Genome IDLNFM01004658
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 11917
End posion on genome 11841
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gccacggcgg
tRNA gene sequence 
CGGAGTGTAGCTCAGCCTGGTAGAGCACCGTGTTCGGGACGCGGGGGCCGGAGGTTCGAA
TCCTCTCACTCCGACCA
Downstream region at tRNA end position 
tcgccgtcat
Secondary structure (Cloverleaf model)
>WENV170711341	Pro	CGG
                   g      ACCA tcgccgtcat
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C T C G       G G A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGCC
                    C - G
                    C - G
                    G - C
                    T + G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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