The detailed information of tRNA gene sequence


Sequence ID>WENV170713007
Genome IDLNFM01022209
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 644
End posion on genome 555
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cagcggttgc
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGTTGAAGGCGCACGCCTGGAAAGTGTGTATACGGGAAACCGTA
TCGCGGGTTCGAATCCCGCTCCCTCCGCCA
Downstream region at tRNA end position 
cataactttt
Secondary structure (Cloverleaf model)
>WENV170713007	Ser	GGA
                   c      GCCA cataactttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATACGGGAAACCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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