The detailed information of tRNA gene sequence


Sequence ID>WENV170714160
Genome IDLNFM01058122
Search identical group
Phylum/Class[LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant
Species
Start position on genome 2388
End posion on genome 2464
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tgcgcaaatt
tRNA gene sequence 
CGGGGTGTAGCTCAGCCTGGTAGAGTACTGCGTTCGGGACGCAGGAGTCGGAGGTTCGAA
TCCTCTCACCCCGACCA
Downstream region at tRNA end position 
ggcgcnnnnn
Secondary structure (Cloverleaf model)
>WENV170714160	Pro	CGG
                   t      ACCA ggcgcnnnnn
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C T C G       G G A G G     C
    T       | | | +                 T T
    G       G A G T
      G T A        A     GAGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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