The detailed information of tRNA gene sequence


Sequence ID>WENV170715162
Genome IDLNQE01000103
Search identical group
Phylum/Class[LNQE] hydrocarbon metagenome; hydrocarbon-contaminated ditch
Species
Start position on genome 5843
End posion on genome 5918
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atgacatttt
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGCAGAGCCACCGGCTCATAACCGGCAGGTCCCAGGTTCGAAT
CCTGGTGGGCCCACCA
Downstream region at tRNA end position 
gaaagggaaa
Secondary structure (Cloverleaf model)
>WENV170715162	Met	CAT
                   t      ACCA gaaagggaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T A
                    T     G G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          C     AGGTC
                    A   C
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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