The detailed information of tRNA gene sequence


Sequence ID>WENV170715177
Genome IDLNQE01000224
Search identical group
Phylum/Class[LNQE] hydrocarbon metagenome; hydrocarbon-contaminated ditch
Species
Start position on genome 18395
End posion on genome 18320
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agcgtgatgc
tRNA gene sequence 
AGGCCAGTAGCTCTAACGGTAGAGCATCGGACTCCAAATCCGAGGGCTGGGGGTTCGAAT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
tatttcacac
Secondary structure (Cloverleaf model)
>WENV170715177	Trp	CCA
                   c      GCCA tatttcacac
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A A T        A      | + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGCT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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