The detailed information of tRNA gene sequence


Sequence ID>WENV170715225
Genome IDLNQE01000891
Search identical group
Phylum/Class[LNQE] hydrocarbon metagenome; hydrocarbon-contaminated ditch
Species
Start position on genome 5863
End posion on genome 5957
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
atatgggttc
tRNA gene sequence 
GGAGAGGTACCGAAGTGGTCGTAACGGGATCGACTCGAAATCGATTTGGGGGCCACAAAG
CTCCCACGGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
gtaagatata
Secondary structure (Cloverleaf model)
>WENV170715225	Ser	CGA
                   c      GCCA gtaagatata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C C C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G G G G G     C
  T           | | |                 T T
  C         A C G G
    G T A          G     TTGGGGGCCACAAAGCTCCCAC
                    A - T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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