The detailed information of tRNA gene sequence


Sequence ID>WENV170715226
Genome IDLNQE01000891
Search identical group
Phylum/Class[LNQE] hydrocarbon metagenome; hydrocarbon-contaminated ditch
Species
Start position on genome 6111
End posion on genome 6204
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgtttttctg
tRNA gene sequence 
GGAGAGATGTCCGAGCGGCTGAAGGAGCACGACTGGAAATCGTGTGTATGCCCCCAAAGG
TGTACCGCGGGTTCAAATCCCGCTCTCTCCGCCA
Downstream region at tRNA end position 
gaaaacaaaa
Secondary structure (Cloverleaf model)
>WENV170715226	Ser	GGA
                   g      GCCA gaaaacaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
      C G A        G      | | | | |     A
    G       G C C T       G C G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TGTATGCCCCCAAAGGTGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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