The detailed information of tRNA gene sequence


Sequence ID>WENV170715244
Genome IDLNQE01001008
Search identical group
Phylum/Class[LNQE] hydrocarbon metagenome; hydrocarbon-contaminated ditch
Species
Start position on genome 5858
End posion on genome 5943
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttttataaat
tRNA gene sequence 
GGAGGGATGGCCGAGTGGTCGATGGCGGCGGTCTTGAAAACCGTTGACCGAAAGGTTCGC
GGGTTCGAATCCTGCTCCCTCCGCCA
Downstream region at tRNA end position 
gaaaataata
Secondary structure (Cloverleaf model)
>WENV170715244	Ser	TGA
                   t      GCCA gaaaataata
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G T C C     A
      T G A        G      | | + | |     G
    G       G C C G       G C G G G     C
    G       + | | |                 T T
    T       T G G C
      C G A        G     TGACCGAAAGGTTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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