The detailed information of tRNA gene sequence


Sequence ID>WENV170715245
Genome IDLNQE01001008
Search identical group
Phylum/Class[LNQE] hydrocarbon metagenome; hydrocarbon-contaminated ditch
Species
Start position on genome 6005
End posion on genome 6099
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ataacaaagc
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTCGAAAGCGATCGCCTGCTAAGCGATTGTACGCCCTTTAAAG
GTGTACCGCGGGTTCAAATCCCGCTCTCTCCGCCA
Downstream region at tRNA end position 
ttttttgaaa
Secondary structure (Cloverleaf model)
>WENV170715245	Ser	GCT
                   c      GCCA ttttttgaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     A
    G       G T C G       G C G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGTACGCCCTTTAAAGGTGTACC
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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