The detailed information of tRNA gene sequence


Sequence ID>WENV170715247
Genome IDLNQE01001013
Search identical group
Phylum/Class[LNQE] hydrocarbon metagenome; hydrocarbon-contaminated ditch
Species
Start position on genome 8671
End posion on genome 8745
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
agcttcactt
tRNA gene sequence 
GGGCGGTTAACTCAGCGGGAGAGTGCTACCTTCACACGGTAGAAGTCACTGGTTCAAATC
CAGTACCGCCTACCA
Downstream region at tRNA end position 
tttatttcga
Secondary structure (Cloverleaf model)
>WENV170715247	Val	CAC
                   t      ACCA tttatttcga
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T A
                    T     T G A C C     A
        G A        A      | | | | |     A
      C     C T C A       A C T G G     C
      G     | | | |                 T T
      G     G A G T
        G A        G     AAGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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