The detailed information of tRNA gene sequence


Sequence ID>WENV170715340
Genome IDLNQE01001595
Search identical group
Phylum/Class[LNQE] hydrocarbon metagenome; hydrocarbon-contaminated ditch
Species
Start position on genome 21411
End posion on genome 21495
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttctatccgg
tRNA gene sequence 
GCCGGGGTAGTCTAGACCGGTAAGGCGGTGGCCTTGAAAGCCACTGGTGCCCTGCACCTC
AAGAGTTCAAATCTCTTCCCCGGCGtct
Downstream region at tRNA end position 
tttccctgca
Secondary structure (Cloverleaf model)
>WENV170715340	Ser	TGA
                   g      Gtct tttccctgca
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T T C T C     A
      A G A        A      | | | | |     A
    C       T C T G       A A G A G     C
    C       | | + |                 T T
    G       A G G C
      G T A        G     TGGTGCCCTGCACCTC
                    G - C
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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