The detailed information of tRNA gene sequence


Sequence ID>WENV170715341
Genome IDLNQE01001598
Search identical group
Phylum/Class[LNQE] hydrocarbon metagenome; hydrocarbon-contaminated ditch
Species
Start position on genome 841
End posion on genome 767
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cctcataccc
tRNA gene sequence 
GGGGTAGTAGGGTAGCCTGGTCCATCCTAGAGCGTTTGGGACGCTTTGACGGCAGTTCGA
ATCTGCCCTACCCCAtcc
Downstream region at tRNA end position 
cgcaccgtgc
Secondary structure (Cloverleaf model)
>WENV170715341	Pro	TGG
                   c      Atcc cgcaccgtgc
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C          T A
                    T     C C G T C     A
    C C G A        A      | | | | |     G
  T         T G G G       G G C A G     C
  G           | | +                 T T
  G         T C C T
    T C C A        A     TGAC
                    G + T
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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