The detailed information of tRNA gene sequence


Sequence ID>WENV170715420
Genome IDLQAB01000090
Search identical group
Phylum/Class[LQAB] termite gut metagenome; bacterial endosymbionts found in Trichonympha flagellates filtered from termite gut
Species
Start position on genome 106866
End posion on genome 106941
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttatagcttt
tRNA gene sequence 
AGGCCAGTAGCTTAATTGGTAGAGTACCGGTCTCCAAAACCGGGTGTTGGGGGTTCGAGT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
atttatctcc
Secondary structure (Cloverleaf model)
>WENV170715420	Trp	CCA
                   t      GCCA atttatctcc
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       T T C G       G G G G G     C
    G       + | | +                 T T
    G       G A G T
      T A          A     GTGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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