The detailed information of tRNA gene sequence


Sequence ID>WENV170715601
Genome IDLQAB01007151
Search identical group
Phylum/Class[LQAB] termite gut metagenome; bacterial endosymbionts found in Trichonympha flagellates filtered from termite gut
Species
Start position on genome 4880
End posion on genome 4974
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aatatgatat
tRNA gene sequence 
GGAGGGGTCGCATAGTAGGTCTAGTGCGCTGGTTTGCTAAACCGGTGTGCGGACATAAAA
GTCCGTACCGAGAGTTCGAATCTCTCCCCCTCCGCtt
Downstream region at tRNA end position 
tgatttttac
Secondary structure (Cloverleaf model)
>WENV170715601	Ser	GCT
                   t      GCtt tgatttttac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C T C     A
    A T G A        C      | | | | |     G
  G         T A C G       G A G A G     C
  G         + | | |                 T T
  T         G T G C
    C T A          G     TGTGCGGACATAAAAGTCCGTACC
                    C - G
                    T + G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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